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Juan Cortés

114
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  • 392741
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Research domains

Robotics [cs.RO] Artificial Intelligence [cs.AI] Bioinformatics [q-bio.QM] Structural Biology [q-bio.BM]

Publications

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Exploring Molecular Energy Landscapes by Coupling the DFTB Potential with a Tree-Based Stochastic Algorithm: Investigation of the Conformational Diversity of Phthalates

Valentin Milia , Nathalie Tarrat , Christophe Zanon , Juan Cortés , Mathias Rapacioli
Journal of Chemical Information and Modeling, 2024, 64 (8), pp.3290-3301. ⟨10.1021/acs.jcim.3c01981⟩
Journal articles hal-04517230v1
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The structure of pathogenic huntingtin exon 1 defines the bases of its aggregation propensity

Carlos A Elena-Real , Amin Sagar , Annika Urbanek , Matija Popovic , Anna Morató
Nature Structural and Molecular Biology, 2023, 30 (3), pp.309 - 320. ⟨10.1038/s41594-023-00920-0⟩
Journal articles hal-04052774v1
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Two-sample goodness-of-fit tests on the flat torus based on Wasserstein distance and their relevance to structural biology

Javier González-Delgado , Alberto González-Sanz , Juan Cortés , Pierre Neuvial
Electronic Journal of Statistics , 2023, 17 (1), pp.1547-1586. ⟨10.1214/23-EJS2135⟩
Journal articles hal-03369795v3
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IGLOO: An Iterative Global Exploration and Local Optimization Algorithm to Find Diverse Low-Energy Conformations of Flexible Molecules

William Margerit , Antoine Charpentier , Cathy Maugis-Rabusseau , Johann Christian Schön , Nathalie Tarrat
Algorithms, 2023, 16 (10), pp.476. ⟨10.3390/a16100476⟩
Journal articles hal-04247201v1
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WASCO: A Wasserstein-based Statistical Tool to Compare Conformational Ensembles of Intrinsically Disordered Proteins

Javier González-Delgado , Amin Sagar , Christophe Zanon , Kresten Lindorff-Larsen , Pau Bernadó
Journal of Molecular Biology, 2023, 435 (14), pp.168053. ⟨10.1016/j.jmb.2023.168053⟩
Journal articles hal-04056662v1
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Coordinated Multi-Robot Trajectory Tracking Control over Sampled Communication ⋆

Enrica Rossi , Marco Tognon , Luca Ballotta , Ruggero Carli , Juan Cortés
Automatica, 2023, 151, pp.110941. ⟨10.1016/j.automatica.2023.110941⟩
Journal articles hal-04010855v1
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Multi-site-specific isotopic labeling accelerates high-resolution structural investigations of pathogenic huntingtin exon-1

Carlos Elena-Real , Annika Urbanek , Xamuel Lund , Anna Morató , Amin Sagar
Structure, 2023, 31 (6), pp.644-650.e5. ⟨10.1016/j.str.2023.04.003⟩
Journal articles hal-04085383v1
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Low Complexity Induces Structure in Protein Regions Predicted as Intrinsically Disordered

Mariane Gonçalves-Kulik , Pablo Mier , Kristina Kastano , Juan Cortés , Pau Bernadó
Biomolecules, 2022, 12 (8), pp.1098. ⟨10.3390/biom12081098⟩
Journal articles hal-03767342v1
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Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation

Bohdan Andriyevsky , Nathalie Tarrat , Juan Cortés , Johann Christian Schön
Royal Society Open Science, 2022, 9 (10), ⟨10.1098/rsos.220436⟩
Journal articles hal-03817247v1
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MoMA-LoopSampler: A web server to exhaustively sample protein loop conformations

Amélie Barozet , Kevin Molloy , Marc Vaisset , Christophe Zanon , Pierre Fauret
Bioinformatics, 2022, 38 (2), pp.552-553. ⟨10.1093/bioinformatics/btab584⟩
Journal articles hal-03326493v1
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Conformational buffering underlies functional selection in intrinsically disordered protein regions

Nicolás González-Foutel , Juliana Glavina , Wade Borcherds , Matías Safranchik , Susana Barrera-Vilarmau
Nature Structural and Molecular Biology, 2022, 29 (8), pp.781-790. ⟨10.1038/s41594-022-00811-w⟩
Journal articles hal-03767337v1
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Indirect Force Control of a Cable-suspended Aerial Multi-Robot Manipulator

Dario Sanalitro , Marco Tognon , A Jimenez Cano , Juan Cortés , Antonio Franchi
IEEE Robotics and Automation Letters, 2022, 7 (3), pp.6726 - 6733. ⟨10.1109/LRA.2022.3176457⟩
Journal articles hal-03664826v1
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Precise Cable-Suspended Pick-and-Place with an Aerial Multi-robot System

A E Jiménez-Cano , Dario Sanalitro , M. Tognon , A. Franchi , J. Cortés
Journal of Intelligent and Robotic Systems, 2022, 105 (3), pp.68. ⟨10.1007/s10846-022-01668-3⟩
Journal articles hal-03748086v1
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The sequence context in poly-alanine regions: structure, function and conservation

Pablo Mier , Carlos Elena-Real , Juan Cortés , Pau Bernadó , Miguel Andrade-Navarro
Bioinformatics, 2022, 38 (21), pp.4851-4858. ⟨10.1093/bioinformatics/btac610⟩
Journal articles hal-03778766v1
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Statistical proofs of the interdependence between nearest neighbor effects on polypeptide backbone conformations

Javier González-Delgado , Pau Bernadó , Pierre Neuvial , Juan Cortés
Journal of Structural Biology, 2022, 214 (4), pp.107907. ⟨10.1016/j.jsb.2022.107907⟩
Journal articles hal-03826233v1
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Interdomain linkers tailor the stability of immunoglobulin repeats in polyproteins

Tanuja Joshi , Surbhi Garg , Alejandro Estaña , Juan Cortés , Pau Bernadó
Biochemical and Biophysical Research Communications, 2021, 550, pp.43-48. ⟨10.1016/j.bbrc.2021.02.114⟩
Journal articles hal-03161535v1
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A tripartite carbohydrate-binding module to functionalize cellulose nanocrystal

Angeline Pelus , Gaëlle Bordes , Sophie Barbe , Younes Bouchiba , Callum Burnard
Biomaterials Science, 2021, 9 (22), pp.7444-7455. ⟨10.1039/d1bm01156a⟩
Journal articles hal-03372120v1
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Current approaches to flexible loop modeling

Amélie Barozet , Pablo Chacón , Juan Cortés
Current Research in Structural Biology, 2021, 3, pp.187-191. ⟨10.1016/j.crstbi.2021.07.002⟩
Journal articles hal-03318652v1
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Molecular flexibility in computational protein design: an algorithmic perspective

Younes Bouchiba , Juan Cortés , Thomas Schiex , Sophie Barbe
Protein Engineering, Design and Selection, 2021, 34, pp.gzab011. ⟨10.1093/protein/gzab011⟩
Journal articles hal-03221838v1
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The diversity of molecular interactions involving intrinsically disordered proteins: A molecular modeling perspective

Ilinka Clerc , Amin Sagar , Alessandro Barducci , Nathalie Sibille , Pau Bernadó
Computational and Structural Biotechnology Journal, 2021, 19, pp.3817-3828. ⟨10.1016/j.csbj.2021.06.031⟩
Journal articles hal-03281983v1
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Protein loops with multiple meta-stable conformations: a challenge for sampling and scoring methods

Amélie Barozet , Marc Bianciotto , Marc Vaisset , Thierry Simeon , Hervé Minoux
Proteins - Structure, Function and Bioinformatics, 2021, 89 (2), pp.218-231. ⟨10.1002/prot.26008⟩
Journal articles hal-02947409v1
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Cooperative Aerial Load Transportation via Sampled Communication

Enrica Rossi , Marco Tognon , Ruggero Carli , Luca Schenato , Juan Cortés
IEEE Control Systems Letters, 2020, 4 (2), pp.277-282. ⟨10.1109/LCSYS.2019.2924413⟩
Journal articles hal-02170909v1
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Aide à la conception

Juan Cortés , Thomas Schiex
Le petit illustré, regards croisés de chercheur.es, 2020
Journal articles hal-03436420v1
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Predicting secondary structure propensities in IDPs using simple statistics from three-residue fragments

Alejandro N Estaña , Amélie Barozet , Assia Mouhand , Marc Vaisset , Christophe Zanon
Journal of Molecular Biology, 2020, 342 (19), pp.5447-5459. ⟨10.1016/j.jmb.2020.07.026⟩
Journal articles hal-02920302v1
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Evidence of the reduced abundance of proline cis conformation in protein poly-proline tracts

Annika N Urbanek , Matija Popovic , Carlos A Elena-Real , Anna Morató , Alejandro N Estaña
Journal of the American Chemical Society, 2020, 142 (17), pp.7976-7986. ⟨10.1021/jacs.0c02263⟩
Journal articles hal-02545935v1
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Flanking regions determine the structure of the poly-glutamine homo- repeat in huntingtin through mechanisms common among glutamine-rich human proteins

Annika N Urbanek , Matija Popovic , Anna Morató , Alejandro N Estaña , Carlos A Elena-Real
Structure, 2020, 28 (7), pp.733-746.e5. ⟨10.1016/j.str.2020.04.008⟩
Journal articles hal-02893075v1
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Full-pose Manipulation Control of a Cable-suspended load with Multiple UAVs under Uncertainties

Dario Sanalitro , Heitor J Savino , Marco Tognon , Juan Cortés , Antonio Franchi
IEEE Robotics and Automation Letters, 2020, 5 (2), pp.2185 - 2191. ⟨10.1109/LRA.2020.2969930⟩
Journal articles hal-02460422v1
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A Reinforcement-Learning-Based Approach to Enhance Exhaustive Protein Loop Sampling

Amélie Barozet , Kevin Molloy , Marc Vaisset , Thierry Simeon , Juan Cortés
Bioinformatics, 2020, 36 (4), pp.1099-1106. ⟨10.1093/bioinformatics/btz684⟩
Journal articles hal-02289207v1
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Carbohydrate Self-Assembly at Surfaces: STM Imaging of Sucrose Conformation and Ordering on Cu(100)

Sabine Abb , Nathalie Tarrat , Juan Cortés , Bohdan Andriyevsky , Ludger Harnau
Angewandte Chemie International Edition, 2019, 58 (25), pp.8336-8340. ⟨10.1002/anie.201901340⟩
Journal articles hal-02146428v1
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Polymorphism in carbohydrate self-assembly at surfaces: STM imaging and theoretical modelling of trehalose on Cu(100)

Sabine Abb , Nathalie Tarrat , Juan Cortés , Bohdan Andriyevsky , Ludger Harnau
RSC Advances, 2019, 9 (61), pp.35813-35819. ⟨10.1039/C9RA06764G⟩
Journal articles hal-02370437v1
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Investigating the Formation of Structural Elements in Proteins Using Local Sequence-Dependent Information and a Heuristic Search Algorithm

Alejandro N Estaña , Malik Ghallab , Pau Bernadó , Juan Cortés
Molecules, 2019, 24 (6), pp.1150. ⟨10.3390/molecules24061150⟩
Journal articles hal-02080026v1
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Simultaneous System Design and Path Planning: A Sampling-based Algorithm.

Kevin Molloy , Laurent Denarie , Marc Vaisset , Thierry Simeon , Juan Cortés
The International Journal of Robotics Research, 2019, 38 (2-3), pp.375-387. ⟨10.1177/0278364918783054⟩
Journal articles hal-01834414v1
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Variable Neighborhood Search with Cost Function Networks To Solve Large Computational Protein Design Problems

Antoine Charpentier , David Mignon , Sophie Barbe , Juan Cortés , Thomas Schiex
Journal of Chemical Information and Modeling, 2019, 59 (1), pp.127-136. ⟨10.1021/acs.jcim.8b00510⟩
Journal articles hal-01943616v1
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A Truly Redundant Aerial Manipulator System with Application to Push-and-Slide Inspection in Industrial Plants

Marco Tognon , Hermes A Tello Chávez , Enrico Gasparin , Quentin Sablé , Davide Bicego
IEEE Robotics and Automation Letters, 2019, 4 (2), pp.1846 - 1851. ⟨10.1109/LRA.2019.2895880⟩
Journal articles hal-01910343v2
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Realistic Ensemble Models of Intrinsically Disordered Proteins Using a Structure-Encoding Coil Database

Alejandro N Estaña , Nathalie Sibille , Elise Delaforge , Marc Vaisset , Juan Cortés
Structure, 2019, 27 (5), pp.381-391.e2. ⟨10.1016/j.str.2018.10.016⟩
Journal articles hal-01954977v1
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Segmenting Proteins into Tripeptides to Enhance Conformational Sampling with Monte Carlo Methods

Laurent Denarie , Ibrahim Al Bluwi , Marc Vaisset , Thierry Simeon , Juan Cortés
Molecules, 2018, 23 (2), pp.373. ⟨10.3390/molecules23020373⟩
Journal articles hal-01708710v1
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The AEROARMS Project: Aerial Robots with Advanced Manipulation Capabilities for Inspection and Maintenance

Anibal Ollero , Guillermo Heredia , Antonio Franchi , Gianluca Antonelli , Konstantin Kondak
IEEE Robotics and Automation Magazine, 2018, 25 (4), pp.12-23. ⟨10.1109/MRA.2018.2852789⟩
Journal articles hal-01870107v1
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Control-Aware Motion Planning for Task-Constrained Aerial Manipulation

Marco Tognon , Elisabetta Cataldi , Hermes Amadeus A Tello Chavez , Gianluca Antonelli , Juan Cortés
IEEE Robotics and Automation Letters, 2018, 3 (3), pp.2478-2484. ⟨10.1109/LRA.2018.2803206⟩
Journal articles hal-01704127v1
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Conformational changes in antibody Fab fragments upon binding and their consequences on the performance of docking algorithms

Amélie Barozet , Marc Bianciotto , Thierry Simeon , Hervé Minoux , Juan Cortés
Immunology Letters, 2018, 200, pp.5-15. ⟨10.1016/j.imlet.2018.06.002⟩
Journal articles hal-01823695v1
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Exhaustive exploration of the conformational landscape of small cyclic peptides using a robotics approach

Maud Jusot , Dirk Stratmann , Marc Vaisset , Jacques Chomilier , Juan Cortés
Journal of Chemical Information and Modeling, 2018, 58 (11), pp.2355-2368. ⟨10.1021/acs.jcim.8b00375⟩
Journal articles hal-01893751v1
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Prediction and clarification of structures of (bio)molecules on surfaces-a review

C. Schön, , C. Oligschleger , Juan Cortés
Zeitschrift fur Naturforschung B, 2018, 71 (5), ⟨10.1515/znb-2015-0222⟩
Journal articles hal-01295377v1
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Hybrid parallelization of a multi-tree path search algorithm: Application to highly-flexible biomolecules

Alejandro N Estaña , Kevin Molloy , Marc Vaisset , Nathalie Sibille , Thierry Simeon
Parallel Computing, 2018, 77, pp.84-100. ⟨10.1016/j.parco.2018.06.005⟩
Journal articles hal-01823694v2
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Structural Characterization of Highly Flexible Proteins by Small-Angle Scattering.

Tiago N Cordeiro , Fatima Herranz-Trillo , Annika N Urbanek , Alejandro N Estaña , Juan Cortés
Advances in Experimental Medicine and Biology, 2017, pp.PP.107-129. ⟨10.1007/978-981-10-6038-0_7⟩
Journal articles hal-01664316v1
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Small-angle scattering studies of intrinsically disordered proteins and their complexes

Tiago N Cordeiro , Fatima Herranz-Trillo , Annika N Urbanek , Alejandro N Estaña , Juan Cortés
Current Opinion in Structural Biology, 2017, 42, pp.15 - 23. ⟨10.1016/j.sbi.2016.10.011⟩
Journal articles hal-01391541v1
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Foreword on special issue on robotics methods for structural and dynamic modeling of molecular systems

Lydia Tapia , Juan Cortés , Amarda Shehu , Jinalin Chen
Robotica, 2016, 34 (08), pp.1677-1678. ⟨10.1017/S0263574716000370⟩
Journal articles hal-01942773v1
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Optimal Path Planning in Complex Cost Spaces With Sampling-Based Algorithms

Didier Devaurs , Thierry Simeon , Juan Cortés
IEEE Transactions on Automation Science and Engineering, 2016, 13 (2), pp.415-424. ⟨10.1109/TASE.2015.2487881⟩
Journal articles hal-01231482v1
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Characterizing Energy Landscapes of Peptides using a Combination of Stochastic Algorithms

Didier Devaurs , Kevin Molloy , Marc Vaisset , Amarda Shehu , Thierry Simeon
IEEE Transactions on NanoBioscience, 2015, 14 (5), pp. 545-552
Journal articles hal-01143833v1
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MoMA-LigPath: A web server to simulate protein-ligand unbinding

Didier Devaurs , Léa Bouard , Marc Vaisset , Christophe Zanon , Ibrahim Al Bluwi
Nucleic Acids Research, 2013, vol. 41, pp. 297-302. ⟨10.1093/nar/gkt380⟩
Journal articles hal-00843321v1
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Modeling protein conformational transitions by a combination of coarse-grained normal mode analysis and robotics-inspired methods

Ibrahim Al Bluwi , Marc Vaisset , Thierry Simeon , Juan Cortés
BMC Structural Biology, 2013, 13 (Suppl 1), pp.S2. ⟨10.1186/1472-6807-13-S1-S2⟩
Journal articles hal-01980925v1
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Parallelizing RRT on large-scale distributed-memory architectures

Didier Devaurs , Thierry Simeon , Juan Cortés
IEEE Transactions on Robotics, 2013, 29 (2), pp. 571-579. ⟨10.1109/TRO.2013.2239571⟩
Journal articles hal-00861579v1
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Rigid-CLL: Avoiding constant-distance computations in cell linked-lists algorithms

V Ruiz de Angulo , Juan Cortés , J. M Porta
Journal of Computational Chemistry, 2012, 33 (3), pp.294-300. ⟨10.1002/jcc.21974⟩
Journal articles hal-02573424v1
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Thumb-loops up for catalysis: a structure/function investigation of a functional loop movement in a GH11 xylanase

Gabriel Paës , Juan Cortés , Thierry Simeon , Michael O'Donohue , Vinh Tran
Computational and Structural Biotechnology Journal, 2012, 1 (2), pp.e201207001. ⟨10.5936/csbj.201207001⟩
Journal articles hal-01267831v1
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Motion planning algorithms for molecular simulations: A survey

Ibrahim Al Bluwi , Thierry Simeon , Juan Cortés
Computer Science Review, 2012, 6 (4), pp.125-143
Journal articles hal-01982596v1
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Encoding Molecular Motions in Voxel Maps

Juan Cortés , Sophie Barbe , Monique Erard , Thierry Simeon
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011, 8 (2), pp.557-563. ⟨10.1109/TCBB.2010.23⟩
Journal articles hal-02652128v2
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Enhancing systematic protein-protein docking methods using ray casting: Application to ATTRACT

Yi Li , Juan Cortés , Thierry Simeon
Proteins - Structure, Function and Bioinformatics, 2011, 79 (11), pp.3037-3049. ⟨10.1002/prot.23127⟩
Journal articles hal-01982609v1
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A randomized tree construction algorithm to explore energy landscapes

Léonard Jaillet , Francesc J Corcho , Juan J Pérez , Juan Cortés
Journal of Computational Chemistry, 2011, 32 (16), pp.3464 - 3474. ⟨10.1002/jcc.21931⟩
Journal articles hal-01894030v1
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A mixed molecular modeling-robotics approach to investigate lipase large molecular motions

Sophie Barbe , Juan Cortés , Thierry Simeon , Pierre Monsan , Magali Siméon
Proteins - Structure, Function and Bioinformatics, 2011, 79 (8), pp.2517-2529. ⟨10.1002/prot.23075⟩
Journal articles hal-02651861v2
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Simulating ligand-induced conformational changes in proteins using a mechanical disassembly method

Juan Cortés , Duc Thanh Le , Romain Iehl , Thierry Simeon
Physical Chemistry Chemical Physics, 2010, 12 (29), pp.8268
Journal articles hal-01986237v1
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Sampling-Based Path Planning on Configuration-Space Costmaps

Léonard Jaillet , Juan Cortés , Thierry Simeon
IEEE Transactions on Robotics, 2010, 26 (4), pp.635-646
Journal articles hal-01986202v1
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Control of Lipase Enantioselectivity by Engineering the Substrate Binding Site and Access Channel

Vincent Lafaquière , Sophie Barbe , Sophie Puech-Guenot , David Guieysse , Juan Cortés
ChemBioChem, 2009, 10 (17), pp.2760-2771. ⟨10.1002/cbic.200900439⟩
Journal articles hal-01986285v1

A Structure-Controlled Investigation of Lipase Enantioselectivity by a Path-Planning Approach

David Guieysse , Juan Cortés , Sophie Puech-Guenot , Sophie Barbe , Vincent Lafaquière
ChemBioChem, 2008, 9 (8), pp.1308-1317. ⟨10.1002/cbic.200700548⟩
Journal articles hal-01986375v1
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Disassembly Path Planning for Complex Articulated Objects

Juan Cortés , Léonard Jaillet , Thierry Simeon
IEEE Transactions on Robotics, 2008, 24 (2), pp.475-481
Journal articles hal-01987955v1
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An NMA-guided path planning approach for computing large-amplitude conformational changes in proteins

Svetlana Kirillova , Juan Cortés , Alin Stefaniu , Thierry Simeon
Proteins - Structure, Function and Bioinformatics, 2008, 70 (1), pp.131-143. ⟨10.1002/prot.21570⟩
Journal articles hal-01987938v1
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A path planning approach for computing large-amplitude motions of flexible molecules

Juan Cortés , Thierry Simeon , Vicente Ruiz de Angulo , David Guieysse , Magali Remaud Simeon
Bioinformatics, 2005, 21 (Suppl 1), pp.i116-i125. ⟨10.1093/bioinformatics/bti1017⟩
Journal articles hal-01988625v1
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Geometric algorithms for the conformational analysis of long protein loops

Juan Cortés , Thierry Simeon , Magali Remaud Simeon , V. Tran
Journal of Computational Chemistry, 2004, 25 (7), pp.956-967. ⟨10.1002/jcc.20021⟩
Journal articles hal-01987902v1
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Manipulation Planning with Probabilistic Roadmaps

Thierry Simeon , Jean-Paul Laumond , Juan Cortés , Anis Sahbani
The International Journal of Robotics Research, 2004, 23 (7-8), pp.729-746
Journal articles hal-01987879v1
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A Sensitivity-Aware Motion Planner (SAMP) to Generate Intrinsically-Robust Trajectories

Simon Wasiela , Paolo Robuffo Giordano , Juan Cortés , Thierry Simeon
IEEE International Conference on Robotics and Automation (ICRA), 2023, London, United Kingdom
Conference papers hal-03808933v2

Computational Design of miniprotein binders

Younes Bouchiba , Juan Cortés , Thomas Schiex , Sophie Barbe
Journées Scientifiques du GDR ChemBio, Jun 2022, Toulouse, France
Conference papers hal-04223586v1

Computational Design of miniprotein binders

Younes Bouchiba , Manon Ruffini , Juan Cortés , Thomas Schiex , Sophie Barbe
GGMM 2021, Sep 2021, Villeneuve d’Ascq, France
Conference papers hal-04223596v1
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A case study of automated dual-arm manipulation in industrial applications

Yoann Solana , Hector Herrero Cueva , Alvaro Rubio Garcia , Sergio Martinez Calvo , Urko Esnaola Campos
24th IEEE International Conference on Emerging Technologies and Factory Automation (ETFA 2019), Sep 2019, Zaragoza, Spain. pp.563-570, ⟨10.1109/ETFA.2019.8869209⟩
Conference papers hal-02327826v1
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Multi-Robot Path Planning with Maintenance of Generalized Connectivity

Yoann Solana , Michele Furci , Juan Cortés , Antonio Franchi
2017 IEEE 1st International Symposium on Multi-Robot and Multi-Agent Systems, Dec 2017, Los Angeles, United States
Conference papers hal-01658557v1
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Combining System Design and Path Planning

Laurent Denarie , Kevin Molloy , Marc Vaisset , Thierry Simeon , Juan Cortés
Workshop on the Algorithmic Foundations of Robotics (WAFR), Dec 2016, San Francisco, United States
Conference papers hal-01364042v1
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Enhancing sampling-based kinodynamic motion planning for quadrotors

Alexandre Boeuf , Juan Cortés , Rachid Alami , Thierry Simeon
IEEE/RSJ International Conference on Intelligent Robots and Systems, Sep 2015, Hamburg, Germany
Conference papers hal-01231717v1
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A Reinforcement Learning Approach to Protein Loop Modeling

Kevin Molloy , Nicolas Buhours , Marc Vaisset , Thierry Simeon , Étienne Ferré
IEEE/RSJ International Conference on Intelligent Robots and Systems, Sep 2015, Hamburg, Germany
Conference papers hal-01206128v1
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Efficient sampling-based approaches to optimal path planning in complex cost spaces

Didier Devaurs , Thierry Simeon , Juan Cortés
International Workshop on the Algorithmic Foundations of Robotics (WAFR), Aug 2014, Istanbul, Turkey. pp.16
Conference papers hal-01062970v1
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Sampling-based methods for a full characterization of energy landscapes of small peptides

Didier Devaurs , Amarda Shehu , Thierry Simeon , Juan Cortés
IEEE International Conference on Bioinformatics and Biomedicine, Nov 2014, Belfast, United Kingdom. 8 p
Conference papers hal-01070405v1
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A multi-tree extension of the Transition-based RRT: Application to ordering-and-pathfinding problems in continuous cost spaces

Didier Devaurs , Thierry Simeon , Juan Cortés
IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS), Sep 2014, Chicago, United States. 6 p
Conference papers hal-01057030v1
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Planning agile motions for quadrotors in constrained environments

Alexandre Boeuf , Juan Cortés , Rachid Alami , Thierry Simeon
IEEE/RSJ International Conference on Intelligent Robots and Systems, Sep 2014, Chicago, United States. 6p., ⟨10.1109/IROS.2014.6942564⟩
Conference papers hal-01187138v1
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A multi-tree approach to compute transition paths on energy landscapes

Didier Devaurs , Marc Vaisset , Thierry Simeon , Juan Cortés
Workshop on Artificial Intelligence and Robotics Methods in Computational Biology, AAAI '13, Jul 2013, Bellevue, United States. pp. 8-13
Conference papers hal-00872247v1
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Enhancing the Transition-based RRT to deal with complex cost spaces

Didier Devaurs , Thierry Simeon , Juan Cortés
Proc. IEEE ICRA '13, May 2013, Karlsruhe, Germany. pp. 4105-4110
Conference papers hal-00872224v1
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Motion planning for 6-D manipulation with aerial towed-cable systems

Montserrat Manubens , Didier Devaurs , Lluis Ros , Juan Cortés
Robotics: Science and Systems (RSS), Jun 2013, Berlin, Germany. 8p
Conference papers hal-00872234v1
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A motion planning approach to 6-D manipulation with aerial towed-cable systems

Montserrat Manubens , Didier Devaurs , Lluis Ros , Juan Cortés
International Micro Air Vehicle Conference and Flight Competition (IMAV '13), Sep 2013, Toulouse, France. 8p
Conference papers hal-00872262v1
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Costmap planning in high dimensional configuration spaces

Romain Iehl , Juan Cortés , Thierry Simeon
IEEE/ASME International Conference on Advanced Intelligent Mechatronics (AIM), Jul 2012, Kachsiung, Taiwan
Conference papers hal-01982586v1
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Coarse-grained elastic networks, normal mode analysis and robotics-inspired methods for modeling protein conformational transitions

Ibrahim Al Bluwi , Marc Vaisset , Thierry Simeon , Juan Cortés
IEEE International Conference on Bioinformatics and Biomedicine Workshops, Oct 2012, Philadelphia, United States. pp.40-47, ⟨10.1109/BIBMW.2012.6470359⟩
Conference papers hal-01981799v1
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Parallelizing RRT on distributed-memory architectures

Didier Devaurs , Thierry Simeon , Juan Cortés
Proc. IEEE ICRA '11, May 2011, Shanghai, China. pp. 2261-2266
Conference papers hal-00872218v1
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Finding enveloping grasps by matching continuous surfaces

Yi Li , Jean-Philippe Saut , Juan Cortés , Thierry Simeon , Daniel Sidobre
IEEE International Conference on Robotics and Automation, 2011, Shangai, China
Conference papers hal-01985779v1
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Planning human-aware motions using a sampling-based costmap planner

Jim Mainprice , Emrah Akin Sisbot , Léonard Jaillet , Juan Cortés , Rachid Alami
IEEE International Conference on Robotics and Automation (ICRA 2011), May 2011, Shanghai, China. ⟨10.1109/ICRA.2011.5980048⟩
Conference papers hal-01976227v1
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Planning pick-and-place tasks with two-hand regrasping

Jean-Philippe Saut , Mokhtar Gharbi , Juan Cortés , Daniel Sidobre , Thierry Simeon
IEEE/RSJ International Conference on Intelligent Robots and Systems, 2010, Taipei, Taiwan
Conference papers hal-01986173v1

Coupling robotics and molecular modelling techniques to understand putative functional motion of the thumb-loop in GH-11 xylanase from Thermobacillus xylanilyticus

Gabriel Paës , Juan Cortés , Thierry Simeon , Michael O'Donohue , Vinh Tran
Lignobiotech One - 2010: 1. Symposium on Biotechnology Applied to Lignocelluloses (Lignobiotech One), Institut National de Recherche Agronomique (INRA). UMR Fractionnement des AgroRessources et Environnement (0614)., Mar 2010, Reims, France
Conference papers hal-02815698v1

Thumb-loops up for catalysis: a structure/function investigation of a functional loop movement in a GH-11 xylanase

Gabriel Paës , Juan Cortés , Thierry Simeon , Michael O'Donohue , Vinh Tran
Biomass-derived Pentoses : from Biotechnology to Fine Chemistry 2010, Nov 2010, Reims, France
Conference papers hal-02822653v1
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Roadmap composition for multi-arm systems path planning

Mokhtar Gharbi , Juan Cortés , Thierry Simeon
2009 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2009), Oct 2009, St. Louis, United States. pp.2471-2476
Conference papers hal-01986305v1
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A path planning approach to (dis)assembly sequencing

Duc Thanh Le , Juan Cortés , Thierry Simeon
2009 IEEE International Conference on Automation Science and Engineering (CASE 2009), Aug 2009, Bangalore, India. pp.286-291
Conference papers hal-01986320v1
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Encoding molecular motions in voxels maps

Juan Cortés , Sophie Barbe , Monique Erard , Thierry Siméon
IEEE International Conference on Robotics and Automation (ICRA), May 2009, Kobe, Japan. ⟨10.1109/ROBOT.2009.5152248⟩
Conference papers hal-04296471v1
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Transition-based RRT for path planning in continuous cost spaces

Léonard Jaillet , Juan Cortés , Thierry Simeon
2008 IEEE/RSJ International Conference on Intelligent Robots and Systems, Sep 2008, Nice, France. pp.2145-2150
Conference papers hal-01986342v1
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A sampling-based path planner for dual-arm manipulation

Mokthar Gharbi , Juan Cortés , Thierry Simeon
2008 IEEE/ASME International Conference on Advanced Intelligent Mechatronics (AIM), Jul 2008, Xian, China. pp.383-388
Conference papers hal-01986353v1
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Molecular Disassembly With Rrt-Like Algorithms

Juan Cortés , Léonard Jaillet , Thierry Simeon
2007 IEEE International Conference on Robotics and Automation (ICRA'07), Apr 2007, Rome, Italy. pp.3301-3306
Conference papers hal-01987923v1
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Disassembly path planning for complex articulated objects

Juan Cortés , Thierry Simeon
IFAC Workshop on Intelligent Assembly and Disassembly, May 2007, Alicante, Spain
Conference papers hal-01993265v1
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Disassembly path planning for objects with articulated parts.

Juan Cortés , Thierry Simeon
IFAC Workshop on Intelligent Assembly and Disassembly, 2007, Alicante, Spain
Conference papers hal-01989229v1
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BioCD : An efficient algorithm for self-collision and distance computation between highly articulated molecular models

Vicente Ruiz de Angulo , Juan Cortés , Thierry Simeon
Robotics : Science and Systems, Jun 2005, Cambridge, United States
Conference papers hal-01988238v1
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Probabilistic Motion Planning for Parallel Mechanisms

Juan Cortés , Thierry Simeon
IEEE International Conference on Robotics and Automation (ICRA'2003), Sep 2003, Taipei, Taiwan. pp.4354-4359
Conference papers hal-01052999v1
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A probabilistic algorithm for manipulation planning under continuous grasps and placements

Anis Sahbani , Juan Cortés , Thierry Simeon
IROS 2002: IEEE/RSJ International Conference on Intelligent Robots and Systems, 2002, Lausanne, Switzerland. pp.1560-1565
Conference papers hal-01988686v1
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A Random Loop Generator for Planning the Motions of Closed Kinematic Chains using PRM Methods

Juan Cortés , Thierry Simeon , Jean-Paul Laumond
2002 IEEE International Conference on Robotics and Automation (ICRA 2002), May 2002, Washington, United States. pp.2141-2146
Conference papers hal-01988698v1
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A manipulation planner for pick and place operations under continuous grasps and placements

Thierry Simeon , Juan Cortés , Anis Sahbani , Jean-Paul Laumond
2002 IEEE International Conference on Robotics and Automation (ICRA 2002), May 2002, Washington, United States. pp.2022-2027
Conference papers hal-01988694v1
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Computer Aided Motion: Move3D within MOLOG

Thierry Simeon , Jean-Paul Laumond , Carl van Geem , Juan Cortés
IEEE International Conference on Robotics and Automation (ICRA 2001), May 2001, Seoul, South Korea. pp.1494-1499
Conference papers hal-01993293v1

Sampling-Based Tree Planners (RRT, EST, and Variations)

Juan Cortés , Thierry Simeon
Encyclopedia of Robotics, Springer Berlin Heidelberg, pp.1-9, 2021, ⟨10.1007/978-3-642-41610-1_170-1⟩
Book sections hal-03165054v1
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Combining System Design and Path Planning

Laurent Denarie , Kevin Molloy , Marc Vaisset , Thierry Simeon , Juan Cortés
Goldberg K., Abbeel P., Bekris K., Miller L. Algorithmic Foundations of Robotics XII, 13, , pp.112-127, 2020, Springer Proceedings in Advanced Robotics, ⟨10.1007/978-3-030-43089-4_8⟩
Book sections hal-02571707v1
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Combining Assembly Planning and Geometric Task Planning

Raphaël Lallement , Juan Cortés , Mamoun Gharbi , Alexandre Boeuf , Rachid Alami
Anibal Ollero; Bruno Siciliano. Aerial Robotic Manipulation. Research, Development and Applications, 129, Springer, pp.299-316, 2019, Springer Tracts in Advanced Robotics, 978-3-030-12945-3. ⟨10.1007/978-3-030-12945-3_22⟩
Book sections hal-02191294v1
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Motion Planning

Alexandre Boeuf , Juan Cortés , Thierry Simeon
Aerial Robotic Manipulation, pp.317-332, 2019, 978-3-030-12945-3. ⟨10.1007/978-3-030-12945-3_23⟩
Book sections hal-02191300v1
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Sampling-Based Motion Planning under Kinematic Loop-Closure Constraints

Juan Cortés , Thierry Simeon
Algorithmic Foundations of Robotics VI, pp.75-90, 2005
Book sections hal-01987883v1
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A General Manipulation Task Planner

Thierry Simeon , Juan Cortés , Anis Sahbani , Jean-Paul Laumond
Algorithmic Foundations of Robotics V. Springer Tracts in Advanced Robotics., pp.311-327, 2004
Book sections hal-01988619v1
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Motion planning algorithms for general closed-chain mechanisms

Juan Cortés
Automatique / Robotique. Institut National Polytechnique de Toulouse - INPT, 2003. Français. ⟨NNT : ⟩
Theses tel-00011002v1
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Algorithmics of motion: From robotics, through structural biology, toward atomic-scale CAD

Juan Cortés
Robotics [cs.RO]. Universite Toulouse III Paul Sabatier, 2014
Habilitation à diriger des recherches tel-01110545v1