Juliette Hayer

Researcher at IRD, MIVEGEC research unit
100 %
Libre accès
28
Documents
Affiliations actuelles
  • Du gène à l'écosystème (MIVEGEC-GeneSys)
  • Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC)
Identifiants chercheurs
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Publications

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Genomic insights into an extensively drug-resistant and hypervirulent Burkholderia dolosa N149 isolate of a novel sequence type (ST2237) from a Vietnamese patient hospitalised for stroke

Quang Huy Nguyen , Cam Linh Nguyen , Thai Son Nguyen , Bich Ngoc Do , Thi Thanh Tam Tran et al.

Journal of Global Antimicrobial Resistance, 2024, 37, pp.44-47. ⟨10.1016/j.jgar.2024.02.009⟩

Article dans une revue hal-04675721v1
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ESBL-producing Escherichia coli prevalence and sharing across seabirds of central Chile

Tania Suarez-Yana , Marília Salgado-Caxito , Juliette Hayer , Zulma Esperanza Rojas-Sereno , Mario Sergio Pino-Hurtado et al.

Science of the Total Environment, 2024, 951, pp.175475. ⟨10.1016/j.scitotenv.2024.175475⟩

Article dans une revue hal-04939749v1
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Whole-genome sequence and resistance determinants of four Elizabethkingia anophelis clinical isolates collected in Hanoi, Vietnam

Florian Commans , Juliette Hayer , Bich Ngoc Do , Thi Thanh Tam Tran , Thi Thu Hang Le et al.

Scientific Reports, 2024, 14 (1), pp.7241. ⟨10.1038/s41598-024-57564-3⟩

Article dans une revue hal-04869908v1
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Multiple clonal transmissions of clinically relevant extended-spectrum beta-lactamase–producing Escherichia coli among livestock, dogs, and wildlife in Chile

Juliette Hayer , Marília Salgado-Caxito , Andrés Opazo-Capurro , Paulina González Muñoz , Javier Millán et al.

Journal of Global Antimicrobial Resistance, 2023, 34, pp.247-252. ⟨10.1016/j.jgar.2023.07.009⟩

Article dans une revue hal-04273440v1
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Baargin: a Nextflow workflow for the automatic analysis of bacterial genomics data with a focus on Antimicrobial Resistance

Juliette Hayer , Jacques Dainat , Ella Marcy , Anne-Laure Bañuls

Journal of Open Source Software, 2023, 8 (90), pp.5397. ⟨10.21105/joss.05397⟩

Article dans une revue hal-04273434v1
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Screening for atypical porcine pestivirus in Swedish boar semen used for artificial insemination and a characterisation of the seminal RNA microbiome including the virome

Hedvig Stenberg , Maja Malmberg , Juliette Hayer

BMC Veterinary Research, 2023, 19 (1), pp.219. ⟨10.1186/s12917-023-03762-6⟩

Article dans une revue hal-04273423v1
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Genomic epidemiology of carbapenemase-producing Gram-negative bacteria at the human-animal-environment interface in Djibouti city, Djibouti

Hasna Saïd Mohamed , Lokman Galal , Juliette Hayer , Julio Benavides , Anne-Laure Bañuls et al.

Science of the Total Environment, 2023, 905, pp.167160. ⟨10.1016/j.scitotenv.2023.167160⟩

Article dans une revue hal-04273420v1
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Large-scale analysis of putative plasmids in clinical multidrug-resistant Escherichia coli isolates from Vietnamese patients

Quang Huy Nguyen , Thi Thu Hang Le , Son Thai Nguyen , Kieu-Oanh Thi Nguyen , Dong Van Quyen et al.

Frontiers in Microbiology, 2023, 14, pp.1094119. ⟨10.3389/fmicb.2023.1094119⟩

Article dans une revue hal-04275497v1
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Congenital tremor and splay leg in piglets – insights into the virome, local cytokine response, and histology

Hedvig Stenberg , Stina Hellman , Lisa Lindström , Magdalena Jacobson , Caroline Fossum et al.

BMC Veterinary Research, 2022, 18 (1), pp.348. ⟨10.1186/s12917-022-03443-w⟩

Article dans une revue hal-04275509v1
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Transcriptome Analysis of an Aedes albopictus Cell Line Single- and Dual-Infected with Lammi Virus and WNV

Pontus Öhlund , Nicolas Delhomme , Juliette Hayer , Jenny Hesson , Anne-Lie Blomström

International Journal of Molecular Sciences, 2022, 23 (2), pp.875. ⟨10.3390/ijms23020875⟩

Article dans une revue hal-04275521v1
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Identification and molecular characterization of highly divergent RNA viruses in cattle, Uganda.

Stephen Balinandi , Juliette Hayer , Harindranath Cholleti , Michelle Wille , Julius Lutwama et al.

Virus Research, 2022, 313, pp.198739. ⟨10.1016/j.virusres.2022.198739⟩

Article dans une revue hal-04275514v1
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Four novel picornaviruses detected in Magellanic Penguins (Spheniscus magellanicus) in Chile

Juliette Hayer , Michelle Wille , Alejandro Font , Marcelo González-Aravena , Helene Norder et al.

Virology, 2021, 560, pp.116-123. ⟨10.1016/j.virol.2021.05.010⟩

Article dans une revue hal-04275544v1
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Small RNA Response to Infection of the Insect-Specific Lammi Virus and Hanko Virus in an Aedes albopictus Cell Line

Pontus Öhlund , Juliette Hayer , Jenny Hesson , Anne-Lie Blomström

Viruses, 2021, 13 (11), pp.2181. ⟨10.3390/v13112181⟩

Article dans une revue hal-04275536v1
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Evolutionary genetics of canine respiratory coronavirus and recent introduction into Swedish dogs

Michelle Wille , Jonas Johansson Wensman , Simon Larsson , Renaud van Damme , Anna-Karin Theelke et al.

Infection, Genetics and Evolution, 2020, 82, pp.104290. ⟨10.1016/j.meegid.2020.104290⟩

Article dans une revue hal-04275591v1
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Simulating Illumina metagenomic data with InSilicoSeq

Hadrien Gourlé , Oskar Karlsson-Lindsjö , Juliette Hayer , Erik Bongcam-Rudloff

Bioinformatics, 2019, 35 (3), pp.521-522. ⟨10.1093/bioinformatics/bty630⟩

Article dans une revue hal-04275660v1
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Viromics Reveal a Number of Novel RNA Viruses in Swedish Mosquitoes

Pontus Öhlund , Juliette Hayer , Hanna Lundén , Jenny Hesson , Anne-Lie Blomström

Viruses, 2019, 11 (11), pp.1027. ⟨10.3390/v11111027⟩

Article dans une revue hal-04275650v1
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Genetic characterization of a novel picorna-like virus in Culex spp. mosquitoes from Mozambique

Harindranath Cholleti , Juliette Hayer , Jose Fafetine , Mikael Berg , Anne-Lie Blomström

Virology Journal, 2018, 15 (1), pp.71. ⟨10.1186/s12985-018-0981-z⟩

Article dans une revue hal-04406517v1
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Viral metagenomics reveals the presence of highly divergent quaranjavirus in<i>Rhipicephalus</i>ticks from Mozambique

Harindranath Cholleti , Juliette Hayer , Fernando Chanisso Mulandane , Kerstin Falk , Jose Fafetine et al.

Infection Ecology & Epidemiology, 2018, 8 (1), pp.1478585. ⟨10.1080/20008686.2018.1478585⟩

Article dans une revue hal-04406520v1
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Phylogenomic analysis of the complete sequence of a gastroenteritis-associated cetacean adenovirus (bottlenose dolphin adenovirus 1) reveals a high degree of genetic divergence

Maja Malmberg , Consuelo Rubio-Guerri , Juliette Hayer , Daniel García-Párraga , Elvira Nieto-Pelegrín et al.

Infection, Genetics and Evolution, 2017, 53, pp.47 - 55. ⟨10.1016/j.meegid.2017.05.008⟩

Article dans une revue hal-04409148v1
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Discovery of Novel Viruses in Mosquitoes from the Zambezi Valley of Mozambique

Harindranath Cholleti , Juliette Hayer , Ana Paula Abilio , Fernando Chanisso Mulandane , Jenny Verner-Carlsson et al.

PLoS ONE, 2016, 11 (9), pp.e0162751. ⟨10.1371/journal.pone.0162751⟩

Article dans une revue hal-04409113v1
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The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions

Philipp Engel , Waldan K Kwong , Quinn Mcfrederick , Kirk E Anderson , Seth Michael Barribeau et al.

mBio, 2016, 7 (2), ⟨10.1128/mbio.02164-15⟩

Article dans une revue hal-04409211v1
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The Intestinal Eukaryotic Virome in Healthy and Diarrhoeic Neonatal Piglets

Oskar E Karlsson , Jenny Larsson , Juliette Hayer , Mikael Berg , Magdalena Jacobson

PLoS ONE, 2016, 11 (3), pp.e0151481. ⟨10.1371/journal.pone.0151481⟩

Article dans une revue hal-04409235v1
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MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies

Martin Norling , Oskar E Karlsson-Lindsjö , Hadrien Gourlé , Erik Bongcam-Rudloff , Juliette Hayer

PLoS ONE, 2016, 11 (8), pp.e0160334. ⟨10.1371/journal.pone.0160334⟩

Article dans une revue hal-04409183v1
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Ultradeep Pyrosequencing and Molecular Modeling Identify Key Structural Features of Hepatitis B Virus RNase H, a Putative Target for Antiviral Intervention.

Juliette Hayer , Christophe Rodriguez , Georgios Germanidis , Gilbert Deléage , Fabien Zoulim et al.

Journal of Virology, 2014, 88 (1), pp.574-82. ⟨10.1128/JVI.03000-13⟩

Article dans une revue inserm-00940367v1
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HBVdb: a knowledge database for Hepatitis B Virus

Juliette Hayer , Fanny Jadeau , G. Deleage , Alan Kay , Fabien Zoulim et al.

Nucleic Acids Research, 2012, 41 (D1), pp.D566-D570. ⟨10.1093/nar/gks1022⟩

Article dans une revue hal-04406497v1
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Mutations that alter use of hepatitis C virus cell entry factors mediate escape from neutralizing antibodies.

Isabel Fofana , Samira Fafi-Kremer , Patric Carolla , Catherine Fauvelle , Muhammad Nauman Zahid et al.

Gastroenterology, 2012, 143 (1), pp.223-233.e9. ⟨10.1053/j.gastro.2012.04.006⟩

Article dans une revue inserm-00701511v1