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The role of coupled DNRA-Anammox during nitrate removal in a highly saline lake
N. Valiente
,
F. Jirsa
,
T. Hein
,
W. Wanek
,
J. Prommer
Journal articles
hal-03427431v1
|
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Dry-Wet Cycles Affect Nitrous Oxide Emissions Across Aquatic-Terrestrial Interfaces: A Mesocosms Study
Renata Pinto
,
Gabriele Weigelhofer
,
Matthias Pucher
,
Rebecca Clare Hood-Nowotny
,
Patricia Bonin
Journal articles
hal-03844523v1
|
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Use of Stress Signals of Their Attached Bacteria to Monitor Sympagic Algae Preservation in Canadian Arctic Sediments
Rémi Amiraux
,
Patricia Bonin
,
Burot Christopher
,
Jean-Francois Rontani
Journal articles
hal-03525505v1
|
|
Bacterial diversity and lipid biomarkers in sea ice and sinking particulate organic material during the melt season in the Canadian Arctic
Rémi Amiraux
,
Jean-Francois Rontani
,
Fabrice Armougom
,
Eléonore Frouin
,
Marcel Babin
Journal articles
hal-03424293v1
|
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Identification of enriched hyperthermophilic microbial communities from a deep-sea hydrothermal vent chimney under electrolithoautotrophic culture conditions
Guillaume Pillot
,
Oulfat Amin Ali
,
Sylvain Davidson
,
Laetitia Shintu
,
Anne Godfroy
Journal articles
hal-03427430v1
|
|
Viability and stress state of bacteria associated with primary production or zooplankton-derived suspended particulate matter in summer along a transect in Baffin Bay (Arctic Ocean)
Christopher Burot
,
Rémi Amiraux
,
Patricia Bonin
,
Sophie Guasco
,
Marcel Babin
Journal articles
hal-03154542v1
|
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Evolution of Thermophilic Microbial Communities from a Deep-Sea Hydrothermal Chimney under Electrolithoautotrophic Conditions with Nitrate
Guillaume Pillot
,
Oulfat Amin Ali
,
Sylvain Davidson
,
Laetitia Shintu
,
Yannick Combet-Blanc
Journal articles
hal-03563636v1
|
|
Similar Methanogenic Shift but Divergent Syntrophic Partners in Anaerobic Digesters Exposed to Direct versus Successive Ammonium Additions
Julie Hardy
,
Patricia Bonin
,
Adele Lazuka
,
Estelle Gonidec
,
Sophie Guasco
Journal articles
hal-03435672v1
|
|
Increasing Hydrostatic Pressure Impacts the Prokaryotic Diversity during Emiliania huxleyi Aggregates Degradation
Christian Tamburini
,
Marc Garel
,
Aude Barani
,
Dominique Boeuf
,
Patricia Bonin
Journal articles
hal-03356668v1
|
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Ecosystem maturity modulates greenhouse gases fluxes from artificial lakes
Fanny Colas
,
Jean-Marc Baudoin
,
Patricia Bonin
,
Léa Cabrol
,
Martin Daufresne
Journal articles
hal-03110280v1
|
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Benthic oxygen dynamics and implication for the maintenance of chronic hypoxia and ecosystem degradation in the Berre lagoon (France)
Sylvain Rigaud
,
Bruno Deflandre
,
Christian Grenz
,
Florian Cesbron
,
Lara Pozzato
Journal articles
hal-03249104v1
|
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Oxygen and light determine the pathways of nitrate reduction in a highly saline lake
Nicolás Valiente
,
Franz Jirsa
,
Thomas Hein
,
Wolfgang Wanek
,
Patricia Bonin
Journal articles
hal-03022672v1
|
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Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning
Johanne Aubé
,
Pavel Senin
,
Patricia Bonin
,
Olivier Pringault
,
Céline Jeziorski
Journal articles
hal-03065790v1
|
|
Stress factors resulting from the Arctic vernal
sea-ice melt: Impact on the viability of bacterial
communities associated with sympagic algae
Rémi Amiraux
,
Christopher Burot
,
Patricia Bonin
,
Guillaume Massé
,
Sophie Guasco
Journal articles
hal-03020051v1
|
|
Stress factors resulting from the Arctic vernal sea-ice melt
Rémi Amiraux
,
Christopher Burot
,
Patricia Bonin
,
Guillaume Massé
,
Sophie Guasco
Journal articles
hal-03458308v1
|
|
Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions
Marc Garel
,
Patricia Bonin
,
Severine Martini
,
Sophie Guasco
,
Marie Roumagnac
Journal articles
hal-02094373v1
|
|
Enhanced biotic degradation of terrestrial POM in an estuarine salinity gradient: interactive effects of organic matter pools and changes of bacterial communities
P. Bonin
,
Ah Prime
,
Ma Galeron
,
S Guasco
,
Jf Rontani
Journal articles
hal-02325680v1
|
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Enhancement of biotic degradation of terrestrial particulate organic matter in an estuarine salinity gradient: Interactive effects of organic matter pools and changes of bacterial communities.
Patricia Bonin
,
Anne-Hélène Prime
,
Mairie-Aimée Galeron
,
Sophie Guasco
,
Jean-Francois Rontani
Journal articles
hal-03019979v1
|
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The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3
Axel Aigle
,
Patricia Bonin
,
Nicolas Fernandez -Nunez
,
Béatrice B. Loriod
,
Sophie Guasco
Journal articles
hal-01766209v1
|
|
Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community
Imen Zaghmouri
,
Valerie Michotey
,
Fabrice Armougom
,
Sophie Guasco
,
Patricia Bonin
Journal articles
hal-01735881v1
|
|
Monitoring photo-oxidative and salinity-induced bacterial stress in the Canadian Arctic using specific lipid tracers
Remi Amiraux
,
Simon Belt
,
Frederic Vaultier
,
Virginie Galindo
,
Michel Gosselin
Journal articles
hal-02325940v1
|
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Physiological and transcriptional approaches reveal connection between nitrogen and manganese cycles in Shewanella algae C6G3
Axel Aigle
,
Patricia Bonin
,
Chantal Iobbi-Nivol
,
Vincent Méjean
,
Valerie Michotey
Journal articles
hal-01493279v1
|
|
Denitrification activity in mangrove sediments varies with associated vegetation
Sheryl Oliveira Fernandes
,
Pinky Dutta
,
Maria-Judith Gonsalves
,
Patricia Bonin
,
P. A. Lokabharathi
Journal articles
hal-01443226v1
|
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Coupling of bacterial nitrification with denitrification and anammox supports N removal in intertidal sediments (Arcachon Bay, France)
Sheryl Fernandes
,
Cedric Javanaud
,
Valerie Michotey
,
Sophie Guasco
,
Pierre Anschutz
Journal articles
hal-01408734v1
|
|
Metatranscriptomes of oil-contaminated marine coastal sediment affected by oil addition and/or by the bioturbating activity of the marine polychaete Hediste diversicolor: Who are the microbial players?
Cécile Militon
,
Alexandre Atkinson
,
Valerie Michotey
,
Celine Jeziorski
,
Cristiana Cravo-Laureau
Journal articles
hal-01408732v1
|
|
The impact of long-term hydrocarbon exposure on the structure, activity, and biogeochemical functioning of microbial mats
Johanne Aubé
,
Pavel Senin
,
Olivier Pringault
,
Patricia Bonin
,
Bruno Deflandre
Journal articles
ird-02048573v1
|
|
Bacteria as part of bioluminescence emission at the deep ANTARES station (North-Western Mediterranean Sea) during a one-year survey
Severine Martini
,
Valerie Michotey
,
Laurie Casalot
,
Patricia Bonin
,
Sophie Guasco
Journal articles
hal-01408722v1
|
|
Substrates specialization in lipid compounds and hydrocarbons of Marinobacter genus.
Patricia Bonin
,
Christophe Vieira
,
Régis Grimaud
,
Cécile Militon
,
Philippe Cuny
Journal articles
hal-01201711v1
|
|
Dynamic of bacterial communities attached to lightened phytodetritus
Morgan Petit
,
Patricia Bonin
,
Remi Amiraux
,
Valerie Michotey
,
Sophie Guasco
Journal articles
hal-01201708v1
|
|
Complete genome sequence of a new member of the Marseilleviridae recovered from the Brackish submarine spring in the Cassis Port-Miou Calanque, France
Gabriel Doutre
,
Bruno Arfib
,
Pierre Rochette
,
Jean-Michel Claverie
,
Patricia Bonin
Journal articles
hal-01457497v1
|
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Environmental microbiology reveals the Earth secret life.
Denis Faure
,
Patricia Bonin
,
Robert Duran
Environmental Science and Pollution Research, 2015, 22 (18), pp.13573-6
Journal articles
hal-01201676v1
|
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Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.
Robert Duran
,
Patricia Bonin
,
Ronan Jezequel
,
Karine Dubosc
,
Claire Gassie
Journal articles
hal-01201709v1
|
|
Aminobacterium thunnarium sp. nov., a mesophilic, amino acid-degrading bacterium isolated from an anaerobic sludge digester, pertaining to the phylum Synergistetes.
Olfa Hamdi
,
Wajdi Ben Hania
,
Anne Postec
,
Hassib Bouallagui
,
Moktar Hamdi
Journal articles
hal-01177834v1
|
|
Ecological significance of Synergistetes in the biological treatment of tuna cooking wastewater by an anaerobic sequencing batch reactor.
Cécile Militon
,
Olfa Hamdi
,
Valerie Michotey
,
Marie-Laure Fardeau
,
Bernard Ollivier
Journal articles
hal-01201712v1
|
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Draft-genome sequence of Shewanella algae strain C6G3
Axel Aigle
,
Valerie Michotey
,
Patricia Bonin
Journal articles
hal-01194459v1
|
|
Use of dispersant in mudflat oil-contaminated sediment: behavior and effects of dispersed oil on micro- and macrobenthos.
Philippe Cuny
,
Franck Gilbert
,
Cécile Militon
,
Georges Stora
,
Patricia Bonin
Journal articles
hal-01201710v1
|
|
Environmental microbiology as a mosaic of explored ecosystems and issues
Denis Faure
,
Patricia Bonin
,
Robert Duran
,
Pierre Amato
,
Florence Arsene-Ploetze
Journal articles
hal-01247096v1
|
|
Anaerobic nitrification-denitrification mediated by Mn-oxides in meso-tidal sediments: Implications for N-2 and N2O production
Sheryl Fernandes
,
Cedric Javanaud
,
Axel Aigle
,
Valerie Michotey
,
Sophie Guasco
Journal articles
hal-01157960v1
|
|
Microbial ecology of hydrocarbon-polluted coastal sediments.
Robert Duran
,
Philippe Cuny
,
Patricia Bonin
,
Cristiana Cravo-Laureau
Journal articles
hal-01208482v1
|
|
Molecular and biochemical characterization of mannitol-1-phosphate dehydrogenase from the model brown alga Ectocarpus sp.
Patricia Bonin
,
Agnès Groisillier
,
Alice Raimbault
,
Anaïs Guibert
,
Catherine Boyen
Journal articles
hal-01200617v1
|
|
Mannitol metabolism in brown algae involves a new phosphatase family.
Agnès Groisillier
,
Zhanru Shao
,
Gurvan Michel
,
Sophie Goulitquer
,
Patricia Bonin
Journal articles
hal-01002445v1
|
|
Bacterial diversity in relatively pristine and anthropogenically-influenced mangrove ecosystems (Goa, India).
Sheryl Fernandes
,
David L Kirchman
,
Valerie Michotey
,
Patricia Bonin
,
P A Lokabharathi
Journal articles
hal-01166877v1
|
|
Anaerobic bacterial degradation of pristenes and phytenes in marine sediments does not lead to pristane and phytane during early diagenesis
Jean-Francois Rontani
,
Patricia Bonin
,
Sophie Guasco
,
Frederic Vaultier
,
John K. Volkman
Organic Geochemistry, 2013, 58, pp.43-55
Journal articles
hal-00807479v1
|
|
Trends in salinity and inorganic nitrogen compounds in the Berre lagoon (1994-2011) bacterial activities and nitrogen budgets
Imen Zaghmouri
,
Valerie Michotey
,
Sophie Guasco
,
Patrick Raimbault
,
Nicole Garcia
Journal articles
hal-00796981v1
|
|
Denitrification activity is closely linked to the total ambient Fe concentration in mangrove sediments of Goa, India
S Fernandes
,
M Gonsalves
,
Valerie Michotey
,
Patricia Bonin
,
P Lokabharathi
Journal articles
hal-00872344v1
|
|
Nitrogen-limited mangrove ecosystems conserve N through dissimilatory nitrate reduction to ammonium
Sheryl Fernandes
,
Patricia Bonin
,
Valerie Michotey
,
Nicole Garcia
,
P. A. Lokabharathi
Journal articles
hal-00714213v1
|
|
Spatio-temporal diversity of free-living and particle-attached prokaryotes in the tropical lagoon of Ahe atoll (Tuamotu Archipelago) and its surrounding oceanic waters
Valerie Michotey
,
Sophie Guasco
,
Dominique Boeuf
,
Nicola Morezzi
,
Brice Durieu
Journal articles
hal-00739805v1
|
|
Desulfosoma profundi sp nov., a thermophilic sulfate-reducing bacterium isolated from a deep terrestrial geothermal spring in France
Patrick Gregoire
,
Marie Laure Fardeau
,
Sophie Guasco
,
Joel Lagiere
,
Jean Cambar
Journal articles
hal-00690553v1
|
|
Denitrification prevails over anammox in tropical mangrove sediments (Goa, India)
Sheryl Fernandes
,
Valerie Michotey
,
Sophie Guasco
,
Patricia Bonin
,
P. A. Loka Bharathi
Journal articles
hal-00700304v1
|
|
Mimicking floodplain reconnection and disconnection using 15N mesocosm incubations
N. Welti
,
E. Bondar-Kunze
,
M. Mair
,
Patricia Bonin
,
W. Wanek
Journal articles
hal-01097829v1
|
|
Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds
R. Grimaud
,
J.-F. Ghiglione
,
Christine Cagnon
,
Béatrice Lauga
,
P.-J. Vaysse
Journal articles
hal-01643936v1
|
|
Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp. nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin.
Patrick Gregoire
,
Marie Laure Fardeau
,
Manon Joseph
,
Sophie Guasco
,
F Hamaide
Systematic and Applied Microbiology, 2011, 34 (7), pp.494-7
Journal articles
hal-00752926v1
|
|
Caldilinea tarbellica sp nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin
Patrick Gregoire
,
Malek Bohli
,
Jean Luc Cayol
,
Manon Bartoli
,
Sophie Guasco
International Journal of Systematic and Evolutionary Microbiology, 2011, 61 (Part6), pp.1436-1441. ⟨10.1099/ijs.0.025676-0⟩
Journal articles
hal-00752944v1
|
|
Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin
Patrick Gregoire
,
Marie Laure Fardeau
,
Manon Bartoli
,
Sophie Guasco
,
Francette Hamaide
Journal articles
hal-00690513v1
|
|
Anaerobic ammonium oxidation mediated by Mn-oxides: from sediment to strain level
Cedric Javanaud
,
Valerie Michotey
,
Sophie Guasco
,
Nicole Garcia
,
Pierre Anschutz
Journal articles
hal-00725010v1
|
|
Fatty acid composition of bacterial strains associated with living cells of the haptophyte Emiliania huxleyi
Nathalie Zabeti
,
Patricia Bonin
,
John K. Volkman
,
Sophie Guasco
,
Jean-Francois Rontani
Journal articles
hal-00538052v1
|
|
Caldinitratiruptor microaerophilus, gen.nov., sp. nov. isolated from a French hot spring (Chaudes-Aigues, Massif Central) : a novel cultivated facultative microaerophilic anaerobic thermophile pertaining to the Symbiobacterium branch within the Firmicutes
Marie-Laure Fardeau
,
Vanessa Barsotti
,
Jean-Luc Cayol
,
Sophie Guasco
,
Valerie Michotey
Journal articles
hal-00506433v1
|
|
Denitrification : An important Pathway for Nitrous Oxide Production in Tropical Mangrove Sediments (Goa, India)
Sheryl Oliveira Fernandes
,
P.A. Loka Bharathi
,
Patricia Bonin
,
Valerie Michotey
Journal articles
hal-00506441v1
|
|
Potential alteration of UK37 paleothermometer due to selective degradation of alkenones by marine bacteria isolated from the haptophyte Emiliania huxleyi
Nathalie Zabeti
,
Patricia Bonin
,
John Kingston Volkmann
,
Ian D. Jameson
,
Sophie Guasco
Journal articles
hal-00538049v1
|
|
Seasonal variation in di-nitrogen fluxes and associated processes (denitrification, anammox and nitrogen fixation) in sediment subject to shellfish farming influences
Laura Minjeaud
,
Valerie Michotey
,
Nicole Garcia
,
Patricia Bonin
Journal articles
hal-00412229v1
|
|
Formation of pristane from a-tocopherol under simulated anoxic sedimentary conditions : A combination of biotic and abiotic degradative processes
Jean-Francois Rontani
,
Mina Nassiry
,
Valerie Michotey
,
Sophie Guasco
,
Patricia Bonin
Journal articles
hal-00506418v1
|
|
Degradation of alkenones by aerobic heterotrophic bacteria : Selective or not ?
Jean-Francois Rontani
,
Ranjita Harji
,
Sophie Guasco
,
F.G. Prahl
,
John K. Volkman
Journal articles
hal-00256845v1
|
|
Nitrogen fluxes from marine sediments : quantification of the associated co-occurring bacterial processes
Laura Minjeaud
,
Patricia Bonin
,
Valerie Michotey
Journal articles
hal-00362536v1
|
|
Aerobic metabolism of vitamin E by marine bacteria : interaction with free radical oxidation (autoxidation) processes
Jean-Francois Rontani
,
Mina Nassiry
,
Sophie Guasco
,
Abdelkrim Mouzdahir
,
Patricia Bonin
Journal articles
hal-00305421v1
|
|
Seasonal and diel distributions of denitrifying and bacterial communities in a hypersaline microbial mat (Camargue, France)
Christelle Desnues
,
Valerie Michotey
,
Andrea Wieland
,
Cui Zhizang
,
Aude Fourçans
Water Research, 2007, 41, pp.3407-3419
Journal articles
hal-00165666v1
|
|
Nitrogen budget in a microbial mat of Camargue (South of France)
Patricia Bonin
,
Valerie Michotey
Marine Ecology Progress Series, 2006, XXX, pp.XX Xx
Journal articles
hal-00087392v1
|
|
Experimental and field evidence for thiyl radical-induced stereomutation of alkenones and other lipids in sediments and seawater
Jean-Francois Rontani
,
Patricia Bonin
,
F.G. Prahl
,
Ian D. Jameson
,
John K. Volkman
Organic Geochemistry, 2006, xxx, pp.1-16
Journal articles
hal-00092653v1
|
|
Molecular, Biochemical, and Physiological Approaches for Understanding the Ecology of Denitrification
Christelle Goréguès
,
Valerie Michotey
,
Patricia Bonin
Microbial ecology, 2005, 49 (2), pp.198-208
Journal articles
hal-02007308v1
|
|
Molecular, Biochemical and Physiological Approaches for Understanding the Ecology of Denitrification
Christèle Goregues
,
Valerie Michotey
,
Patricia Bonin
Microbial ecology, 2005, 49, pp.198-208
Journal articles
hal-00084748v1
|
|
The anaerobic hydrocarbon biodegrading bacteria: An overview
Patricia Bonin
,
Valerie Michotey
,
Cristiana Cravo-Laureau
,
Agnès Hirschler-Réa
Journal articles
hal-01631864v1
|
|
Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats
Christelle Goréguès
,
Valerie Michotey
,
Patricia Bonin
Ophelia, 2004, 58 (3), pp.263-270
Journal articles
hal-02008690v1
|
|
Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats
C Goregues
,
Valerie Michotey
,
Patricia Bonin
Ophelia, 2004, 58, pp.263-270
Journal articles
hal-00796815v1
|
|
The influence of nitrate and carbon inputs on the end products of bacterial nitrate dissimilation in marine sediment
P. Bonin
,
P. Omnes
,
A. Chalamet
Journal articles
hal-02868618v1
|
|
Simultaneous occurrence of denitrification and nitrate ammonification in sediments of the French Mediterranean Coast
P. Bonin
,
P. Omnes
,
Alain Chalamet
Journal articles
hal-02874490v1
|
|
Evidence for anaerobic bacterial processes in the water column: denitrification and dissimilatory nitrate ammonification in the northwestern Mediterranean Sea
Valerie Michotey
,
Patricia Bonin
Marine Ecology Progress Series, 1997, 160, pp.47-56
Journal articles
hal-00708672v1
|
|
Aerobic and anaerobic metabolism of 6,10,14-trimethylpentadecan-2-one by a denitrifying bacterium isolated from marine sediments
Jean-Francois Rontani
,
Mj Gilewicz
,
Valerie Michotey
,
Tl Zheng
,
Patricia Bonin
Applied and Environmental Microbiology, 1997, 63, pp.636-643
Journal articles
hal-00706691v1
|
|
Hydrocarbon influence on denitrification in bioturbated Mediterranean coastal sediments
Franck Gilbert
,
Georges Stora
,
Patricia Bonin
,
Yveline Ledréau
,
Gilbert Mille
Journal articles
hal-00823238v1
|
|
Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium.
Michel J. Gauthier
,
Bénédicte Lafay
,
Richard Christen
,
Luis Fernandez
,
M. Acquaviva
International Journal of Systematic Bacteriology, 1992, 42 (4), pp.568-76
Journal articles
hal-00412938v1
|