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An Integrated Pipeline for Phenotypic Characterization, Clustering and Visualization of Patient Cohorts in a Rare Disease-Oriented Clinical Data Warehouse
Xiaoyi Chen
,
Junyuan Wang
,
Carole Faviez
,
Xiaomeng Wang
,
Marc Vincent
et al.
Studies in Health Technology and Informatics, 2024, Studies in Health Technology and Informatics, 316, pp.1785-1789. ⟨10.3233/SHTI240777⟩
Article dans une revue
hal-04726931
v1
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Objectivizing issues in the diagnosis of complex rare diseases: lessons learned from testing existing diagnosis support systems on ciliopathies
Carole Faviez
,
Xiaoyi Chen
,
Nicolas Garcelon
,
Mohamad Zaidan
,
Katy Billot
et al.
Article dans une revue
hal-04685782
v1
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Performance and clinical utility of a new supervised machine-learning pipeline in detecting rare ciliopathy patients based on deep phenotyping from electronic health records and semantic similarity
Carole Faviez
,
Marc Vincent
,
Nicolas Garcelon
,
Olivia Boyer
,
Bertrand Knebelmann
et al.
Article dans une revue
hal-04455861
v1
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Improving Patient Similarity Using Different Modalities of Phenotypes Extracted from Clinical Narratives
Xiaoyi Chen
,
Carole Faviez
,
Marc Vincent
,
Sophie Saunier
,
Nicolas Garcelon
et al.
Studies in Health Technology and Informatics, 2023, Studies in Health Technology and Informatics, ⟨10.3233/SHTI230342⟩
Article dans une revue
hal-04339484
v1
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The genetic landscape and clinical spectrum of nephronophthisis and related ciliopathies
Friederike Petzold
,
Katy Billot
,
Xiaoyi Chen
,
Charline Henry
,
Emilie Filhol
et al.
Article dans une revue
hal-04339478
v1
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Assessment of the Early Detection of Anosmia and Ageusia Symptoms in COVID-19 on Twitter: Retrospective Study
Carole Faviez
,
Manissa Talmatkadi
,
Pierre Foulquié
,
Adel Mebarki
,
Stéphane Schück
et al.
Article dans une revue
hal-04227117
v1
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A Multi-Omics Common Data Model for Primary Immunodeficiencies
Mélanie Buy
,
William Digan
,
Xiaoyi Chen
,
Julien Husson
,
Mickael Ménager
et al.
Studies in Health Technology and Informatics, 2022, Studies in Health Technology and Informatics, 290, pp.56-60. ⟨10.3233/SHTI220031⟩
Article dans une revue
hal-04032071
v1
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Patient-Patient Similarity-Based Screening of a Clinical Data Warehouse to Support Ciliopathy Diagnosis
Xiaoyi Chen
,
Carole Faviez
,
Marc Vincent
,
Luis Briseño-Roa
,
Hassan Faour
et al.
Article dans une revue
hal-03629207
v1
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Fuzzy Matching for Symptom Detection in Tweets: Application to Covid-19 During the First Wave of the Pandemic in France
Carole Faviez
,
Pierre Foulquié
,
Xiaoyi Chen
,
Adel Mebarki
,
Sophie Quennelle
et al.
Article dans une revue
hal-03253247
v1
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L'équipe-projet HeKA
Adrien Coulet
,
Stéphanie Allassonniere
,
François Angoulvant
,
Anita Burgun
,
Xiaoyi Chen
et al.
Bulletin de l'Association Française pour l'Intelligence Artificielle, 2021, 112, pp.29-32
Article dans une revue
hal-03485904
v1
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Differential association between inflammatory cytokines and multiorgan dysfunction in COVID-19 patients with obesity
Marie-Agnès Dragon-Durey
,
Xiaoyi Chen
,
Amos Kirilovsky
,
Nadine Ben Hamouda
,
Carine El Sissy
et al.
Article dans une revue
hal-03239731
v1
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Identification of Similar Patients Through Medical Concept Embedding from Electronic Health Records: A Feasibility Study for Rare Disease Diagnosis
Xiaoyi Chen
,
Carole Faviez
,
Marc Vincent
,
Nicolas Garcelon
,
Sophie Saunier
et al.
Article dans une revue
hal-03253313
v1
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Concerns Discussed on Chinese and French Social Media During the COVID-19 Lockdown: Comparative Infodemiology Study Based on Topic Modeling
Stéphane Schück
,
Pierre Foulquié
,
Adel Mebarki
,
Carole Faviez
,
Mickaïl Khadhar
et al.
Article dans une revue
hal-03253371
v1
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Analytical validation of the Immunoscore and its associated prognostic value in patients with colon cancer.
Florence Marliot
,
Xiaoyi Chen
,
Amos Kirilovsky
,
Thomas Sbarrato
,
Carine El Sissy
et al.
Article dans une revue
hal-03023246
v1
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Diagnosis support systems for rare diseases: a scoping review
Carole Faviez
,
Xiaoyi Chen
,
Nicolas Garcelon
,
Antoine Neuraz
,
Bertrand Knebelmann
et al.
Article dans une revue
hal-02570643
v1
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Phenotypic similarity for rare disease: ciliopathy diagnoses and subtyping
Xiaoyi Chen
,
Nicolas Garcelon
,
Antoine Neuraz
,
Katy Billot
,
Marc Lelarge
et al.
Article dans une revue
hal-02893160
v1
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The Adverse Drug Reactions From Patient Reports in Social Media Project: Protocol for an Evaluation Against a Gold Standard
Armelle Arnoux-Guenegou
,
Yannick Girardeau
,
Xiaoyi Chen
,
Myrtille Deldossi
,
Rim Aboukhamis
et al.
Article dans une revue
hal-03253382
v1
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Mining Patients' Narratives in Social Media for Pharmacovigilance: Adverse Effects and Misuse of Methylphenidate
Xiaoyi Chen
,
Carole Faviez
,
Stéphane Schuck
,
Agnès Lillo-Le-Louët
,
Nathalie Texier
et al.
Article dans une revue
hal-02103689
v1
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Mining Adverse Drug Reactions in Social Media with Named Entity Recognition and Semantic Methods.
Xiaoyi Chen
,
Myrtille Deldossi
,
Rim Aboukhamis
,
Carole Faviez
,
Badisse Dahamna
et al.
Article dans une revue
hal-03251581
v1
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Automated flow cytometric analysis across large numbers of samples and cell types.
Xiaoyi Chen
,
Milena Hasan
,
Valentina Libri
,
Alejandra Urrutia
,
Benoît Beitz
et al.
Article dans une revue
pasteur-01341702
v1
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